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20:32883308 G / A


Filter Status
PASS
dbSNP
rs13043752
Allele Frequency
0.01181
Filtering AF
0.01708 (European (Non-Finnish))
Allele Count
1393 / 117904
UCSC
20-32883308-G-A
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 6 transcripts in 1 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 1161 64732 10 0.01794
East Asian 0 8550 0 0
Other 13 850 1 0.01529
African 30 9990 0 0.003003
Latino 62 11376 0 0.00545
South Asian 84 16386 1 0.005126
European (Finnish) 43 6020 0 0.007143
Total 1393 117904 12 0.01181

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.