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20:368905 A / G


Filter Status
PASS
dbSNP
rs2295490
Allele Frequency
0.1834
Filtering AF
0.378 (South Asian)
Allele Count
21807 / 118924
UCSC
20-368905-A-G
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 4 transcripts in 1 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 9874 65106 794 0.1517
East Asian 1684 8528 160 0.1975
Other 173 890 20 0.1944
African 1665 9938 130 0.1675
Latino 861 11478 49 0.07501
South Asian 6342 16434 1237 0.3859
European (Finnish) 1208 6550 109 0.1844
Total 21807 118924 2499 0.1834

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.