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20:61982085 A / G


Filter Status
PASS
dbSNP
rs1044394
Allele Frequency
0.9196
Filtering AF
0.982 (East Asian)
Allele Count
111244 / 120976
UCSC
20-61982085-A-G
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 4 transcripts in 1 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 62005 66362 28961 0.9343
East Asian 8641 8644 4319 0.9997
Other 838 906 390 0.9249
African 6756 10376 2215 0.6511
Latino 11042 11562 5282 0.955
South Asian 15688 16512 7454 0.9501
European (Finnish) 6274 6614 2981 0.9486
Total 111244 120976 51602 0.9196

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.