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21:16340289 C / T


Filter Status
PASS
dbSNP
rs2229741
Allele Frequency
0.4972
Filtering AF
0.7767 (East Asian)
Allele Count
59853 / 120378
UCSC
21-16340289-C-T
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 6 transcripts in 3 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 27891 66162 5808 0.4216
East Asian 6755 8524 2658 0.7925
Other 437 908 93 0.4813
African 7607 10364 2811 0.734
Latino 6917 11394 2147 0.6071
South Asian 7363 16468 1680 0.4471
European (Finnish) 2883 6558 635 0.4396
Total 59853 120378 15832 0.4972

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.