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21:37518706 G / A


Filter Status
PASS
dbSNP
rs1056892
Allele Frequency
0.3742
Filtering AF
0.4769 (South Asian)
Allele Count
45391 / 121316
UCSC
21-37518706-G-A
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 9 transcripts in 2 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 23214 66694 4006 0.3481
East Asian 3609 8632 766 0.4181
Other 342 904 61 0.3783
African 4926 10392 1180 0.474
Latino 3166 11570 457 0.2736
South Asian 8021 16512 2005 0.4858
European (Finnish) 2113 6612 349 0.3196
Total 45391 121316 8824 0.3742

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.