Interested in working on the development of this resource? Apply here.

22:24837301 T / C


Filter Status
PASS
dbSNP
rs5751876
Allele Frequency
0.5453
Filtering AF
0.6016 (Latino)
Allele Count
60768 / 111448
UCSC
22-24837301-T-C
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 7 transcripts in 3 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 37346 62432 10949 0.5982
East Asian 4195 8220 1032 0.5103
Other 449 802 121 0.5599
African 3502 9556 631 0.3665
Latino 6758 11010 2015 0.6138
South Asian 5130 13504 916 0.3799
European (Finnish) 3388 5924 916 0.5719
Total 60768 111448 16580 0.5453

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.