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22:29091788 T / G


Filter Status
PASS
dbSNP
rs200928781
Allele Frequency
4.144e-05
Filtering AF
2.9e-05 (European (Non-Finnish))
Allele Count
5 / 120646
UCSC
22-29091788-T-G
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 5 66304 0 7.541e-05
East Asian 0 8650 0 0
Other 0 908 0 0
African 0 10104 0 0
Latino 0 11556 0 0
South Asian 0 16510 0 0
European (Finnish) 0 6614 0 0
Total 5 120646 0 4.144e-05

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.