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22:29121087 A / G


Filter Status
PASS
dbSNP
rs17879961
Allele Frequency
0.004096
Filtering AF
0.004335 (European (Non-Finnish))
Allele Count
497 / 121350
UCSC
22-29121087-A-G
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 318 66720 2 0.004766
East Asian 0 8654 0 0
Other 5 906 0 0.005519
African 1 10368 0 9.645e-05
Latino 0 11578 0 0
South Asian 1 16510 0 6.057e-05
European (Finnish) 172 6614 4 0.02601
Total 497 121350 6 0.004096

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.