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22:42524947 C / T


Warning! This variant is only covered in 18236 individuals (adjusted allele number = 36472).
This means that the site is covered in fewer than 80% of the individuals in ExAC, which may indicate a low-quality site.


Filter Status
PASS
dbSNP
rs3892097
Allele Frequency
0.1708
Filtering AF
0.225 (European (Non-Finnish))
Allele Count
6228 / 36472
UCSC
22-42524947-C-T
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 4267 18490 393 0.2308
East Asian 10 2368 0 0.004223
Other 48 314 5 0.1529
African 395 3318 37 0.119
Latino 244 1558 11 0.1566
South Asian 1046 9016 72 0.116
European (Finnish) 218 1408 12 0.1548
Total 6228 36472 530 0.1708

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.