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22:42525085 CA / C


Filter Status
PASS
dbSNP
rs5030655
Allele Frequency
0.007929
Filtering AF
0.01017 (European (Non-Finnish))
Allele Count
808 / 101902
UCSC
22-42525085-CA-C
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 613 56352 13 0.01088
East Asian 0 7968 0 0
Other 3 734 0 0.004087
African 21 7304 1 0.002875
Latino 41 9768 2 0.004197
South Asian 19 14682 0 0.001294
European (Finnish) 111 5094 3 0.02179
Total 808 101902 19 0.007929

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.