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3:122003757 G / T


Filter Status
PASS
dbSNP
rs1801725
Allele Frequency
0.1269
Filtering AF
0.1896 (South Asian)
Allele Count
15391 / 121254
UCSC
3-122003757-G-T
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 4 transcripts in 2 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 9639 66650 764 0.1446
East Asian 267 8644 6 0.03089
Other 150 906 10 0.1656
African 366 10376 6 0.03527
Latino 871 11558 43 0.07536
South Asian 3223 16508 357 0.1952
European (Finnish) 875 6612 51 0.1323
Total 15391 121254 1237 0.1269

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.