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3:12393125 C / G


Filter Status
PASS
dbSNP
rs1801282
Allele Frequency
0.1101
Filtering AF
0.1225 (Latino)
Allele Count
13354 / 121246
UCSC
3-12393125-C-G
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 8148 66694 525 0.1222
East Asian 372 8598 5 0.04327
Other 94 908 5 0.1035
African 204 10404 1 0.01961
Latino 1475 11528 88 0.1279
South Asian 1979 16504 143 0.1199
European (Finnish) 1082 6610 87 0.1637
Total 13354 121246 854 0.1101

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.