Interested in working on the development of this resource? Apply here.

3:129155670 C / T


Filter Status
PASS
dbSNP
rs10342
Allele Frequency
0.08106
Filtering AF
0.1072 (South Asian)
Allele Count
9839 / 121380
UCSC
3-129155670-C-T
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 5767 66732 252 0.08642
East Asian 503 8652 16 0.05814
Other 100 908 6 0.1101
African 718 10388 30 0.06912
Latino 645 11576 25 0.05572
South Asian 1840 16510 121 0.1114
European (Finnish) 266 6614 9 0.04022
Total 9839 121380 459 0.08106

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.