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3:133494354 C / T


Filter Status
PASS
dbSNP
rs1049296
Allele Frequency
0.1602
Filtering AF
0.2504 (East Asian)
Allele Count
19445 / 121410
UCSC
3-133494354-C-T
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 5 transcripts in 1 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 10726 66740 889 0.1607
East Asian 2244 8652 277 0.2594
Other 154 908 17 0.1696
African 743 10406 26 0.0714
Latino 1307 11578 74 0.1129
South Asian 3571 16512 384 0.2163
European (Finnish) 700 6614 33 0.1058
Total 19445 121410 1700 0.1602

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.