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3:172166144 G / A


Filter Status
PASS
dbSNP
rs2232165
Allele Frequency
0.03312
Filtering AF
0.07902 (African)
Allele Count
3593 / 108498
UCSC
3-172166144-G-A
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 2 transcripts in 1 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 1859 59418 33 0.03129
East Asian 4 7668 0 0.0005216
Other 30 780 0 0.03846
African 754 8978 21 0.08398
Latino 153 10478 2 0.0146
South Asian 735 15558 20 0.04724
European (Finnish) 58 5618 0 0.01032
Total 3593 108498 76 0.03312

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.