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3:186338425 A / C


Filter Status
PASS
dbSNP
rs1071592
Allele Frequency
0.7659
Filtering AF
0.8472 (South Asian)
Allele Count
92926 / 121334
UCSC
3-186338425-A-C
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 3 transcripts in 1 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 50324 66684 19066 0.7547
East Asian 7146 8652 2944 0.8259
Other 719 906 281 0.7936
African 8833 10406 3740 0.8488
Latino 7240 11576 2292 0.6254
South Asian 14172 16498 6105 0.859
European (Finnish) 4492 6612 1529 0.6794
Total 92926 121334 35957 0.7659

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.