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3:38622661 C / T


Filter Status
PASS
dbSNP
rs137854609
Allele Frequency
0.0001248
Filtering AF
0.00012 (European (Non-Finnish))
Allele Count
13 / 104192
UCSC
3-38622661-C-T
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 12 57670 0 0.0002081
East Asian 0 7646 0 0
Other 0 738 0 0
African 0 7652 0 0
Latino 0 10030 0 0
South Asian 1 15248 0 6.558e-05
European (Finnish) 0 5208 0 0
Total 13 104192 0 0.0001248

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.