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3:38645249 C / T


Filter Status
PASS
dbSNP
rs12720452
Allele Frequency
0.00023
Filtering AF
0.000223 (European (Non-Finnish))
Allele Count
25 / 108674
UCSC
3-38645249-C-T
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 21 63028 0 0.0003332
East Asian 0 8480 0 0
Other 0 776 0 0
African 1 9280 0 0.0001078
Latino 0 11438 0 0
South Asian 1 9062 0 0.0001104
European (Finnish) 2 6610 0 0.0003026
Total 25 108674 0 0.00023

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.