Interested in working on the development of this resource? Apply here.

3:38663892 C / T


Warning! This variant is only covered in 37137 individuals (adjusted allele number = 74274).
This means that the site is covered in fewer than 80% of the individuals in ExAC, which may indicate a low-quality site.


Filter Status
PASS
dbSNP
rs199473062
Allele Frequency
2.693e-05
Filtering AF
0 (None)
Allele Count
2 / 74274
UCSC
3-38663892-C-T
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 1 41632 0 2.402e-05
East Asian 0 5274 0 0
Other 0 572 0 0
African 0 6510 0 0
Latino 0 5520 0 0
South Asian 1 10644 0 9.395e-05
European (Finnish) 0 4122 0 0
Total 2 74274 0 2.693e-05

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.