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3:41275106 T / C


Filter Status
PASS
dbSNP
rs4135379
Allele Frequency
0.0004777
Filtering AF
0.00417 (African)
Allele Count
58 / 121404
UCSC
3-41275106-T-C
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 8 transcripts in 1 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 0 66738 0 0
East Asian 0 8652 0 0
Other 0 908 0 0
African 55 10406 0 0.005285
Latino 3 11574 0 0.0002592
South Asian 0 16512 0 0
European (Finnish) 0 6614 0 0
Total 58 121404 0 0.0004777

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.