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3:46399208 G / A


Filter Status
PASS
dbSNP
rs1799864
Allele Frequency
0.1267
Filtering AF
0.2317 (Latino)
Allele Count
15350 / 121140
UCSC
3-46399208-G-A
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 6787 66534 365 0.102
East Asian 1786 8630 199 0.207
Other 99 908 6 0.109
African 1670 10374 144 0.161
Latino 2766 11568 361 0.2391
South Asian 1811 16512 107 0.1097
European (Finnish) 431 6614 10 0.06516
Total 15350 121140 1192 0.1267

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.