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3:46415061 G / A


Filter Status
PASS
dbSNP
rs1800452
Allele Frequency
0.00503
Filtering AF
0.05127 (East Asian)
Allele Count
610 / 121274
UCSC
3-46415061-G-A
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 4 transcripts in 2 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 75 66688 0 0.001125
East Asian 479 8652 14 0.05536
Other 4 908 0 0.004405
African 1 10386 0 9.628e-05
Latino 8 11576 0 0.0006911
South Asian 40 16450 1 0.002432
European (Finnish) 3 6614 0 0.0004536
Total 610 121274 15 0.00503

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.