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3:49455325 C / T


Filter Status
PASS
dbSNP
rs121964985
Allele Frequency
7.458e-05
Filtering AF
4.9e-05 (European (Non-Finnish))
Allele Count
9 / 120670
UCSC
3-49455325-C-T
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 7 66232 0 0.0001057
East Asian 0 8616 0 0
Other 0 892 0 0
African 0 10286 0 0
Latino 0 11548 0 0
South Asian 1 16506 0 6.058e-05
European (Finnish) 1 6590 0 0.0001517
Total 9 120670 0 7.458e-05

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.