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3:8787313 C / G


Filter Status
PASS
dbSNP
rs116840776
Allele Frequency
0.001125
Filtering AF
0.001369 (South Asian)
Allele Count
136 / 120922
UCSC
3-8787313-C-G
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 6 transcripts in 3 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 79 66568 0 0.001187
East Asian 0 8638 0 0
Other 1 898 0 0.001114
African 6 10386 0 0.0005777
Latino 17 11528 0 0.001475
South Asian 31 16386 0 0.001892
European (Finnish) 2 6518 0 0.0003068
Total 136 120922 0 0.001125

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.