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4:110883121 G / A


Filter Status
PASS
dbSNP
rs11568943
Allele Frequency
0.09846
Filtering AF
0.2308 (African)
Allele Count
11949 / 121354
UCSC
4-110883121-G-A
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 4 transcripts in 1 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 4347 66734 144 0.06514
East Asian 1676 8652 171 0.1937
Other 82 908 5 0.09031
African 2483 10404 287 0.2387
Latino 1547 11532 116 0.1341
South Asian 1416 16512 62 0.08576
European (Finnish) 398 6612 9 0.06019
Total 11949 121354 794 0.09846

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.