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4:111542459 C / T


Filter Status
PASS
dbSNP
rs28936409
Allele Frequency
1.648e-05
Filtering AF
0 (None)
Allele Count
2 / 121330
UCSC
4-111542459-C-T
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 0 66682 0 0
East Asian 0 8648 0 0
Other 0 908 0 0
African 0 10392 0 0
Latino 1 11574 0 8.64e-05
South Asian 1 16512 0 6.056e-05
European (Finnish) 0 6614 0 0
Total 2 121330 0 1.648e-05

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.