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4:120422407 T / G


Filter Status
PASS
dbSNP
rs149385790
Allele Frequency
0.00105
Filtering AF
0.001599 (European (Non-Finnish))
Allele Count
125 / 119098
UCSC
4-120422407-T-G
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 122 65282 0 0.001869
East Asian 0 8458 0 0
Other 0 898 0 0
African 2 10324 0 0.0001937
Latino 0 11342 0 0
South Asian 0 16276 0 0
European (Finnish) 1 6518 0 0.0001534
Total 125 119098 0 0.00105

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.