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4:126412891 C / T


Filter Status
PASS
dbSNP
rs1014867
Allele Frequency
0.0543
Filtering AF
0.05933 (European (Non-Finnish))
Allele Count
6080 / 111964
UCSC
4-126412891-C-T
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 2 transcripts in 1 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 3747 61464 124 0.06096
East Asian 496 7984 10 0.06212
Other 46 850 3 0.05412
African 563 9458 11 0.05953
Latino 384 10904 6 0.03522
South Asian 624 14928 12 0.0418
European (Finnish) 220 6376 3 0.0345
Total 6080 111964 169 0.0543

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.