Interested in working on the development of this resource? Apply here.

4:38777236 T / G


Filter Status
PASS
dbSNP
rs10856839
Allele Frequency
0.2451
Filtering AF
0.4584 (African)
Allele Count
28120 / 114732
UCSC
4-38777236-T-G
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 6 transcripts in 1 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 12216 64720 1173 0.1888
East Asian 1773 8554 193 0.2073
Other 231 850 38 0.2718
African 4735 10084 1122 0.4696
Latino 2605 11450 305 0.2275
South Asian 4812 12480 918 0.3856
European (Finnish) 1748 6594 246 0.2651
Total 28120 114732 3995 0.2451

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.