Interested in working on the development of this resource? Apply here.

4:39448529 G / A


Filter Status
PASS
dbSNP
rs17618244
Allele Frequency
0.1796
Filtering AF
0.1929 (European (Non-Finnish))
Allele Count
20691 / 115204
UCSC
4-39448529-G-A
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 1 transcripts in 1 genes:

missense
Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 12342 63026 1190 0.1958
East Asian 1467 8284 120 0.1771
Other 151 854 15 0.1768
African 692 9172 27 0.07545
Latino 2252 11400 214 0.1975
South Asian 2781 15890 243 0.175
European (Finnish) 1006 6578 72 0.1529
Total 20691 115204 1881 0.1796

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.