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4:40356422 A / G


Filter Status
PASS
dbSNP
rs10009228
Allele Frequency
0.7837
Filtering AF
0.8507 (East Asian)
Allele Count
95124 / 121374
UCSC
4-40356422-A-G
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 2 transcripts in 1 genes:

missense
Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 54045 66730 21933 0.8099
East Asian 7494 8642 3273 0.8672
Other 744 908 302 0.8194
African 7000 10404 2363 0.6728
Latino 7429 11568 2397 0.6422
South Asian 13132 16510 5239 0.7954
European (Finnish) 5280 6612 2110 0.7985
Total 95124 121374 37617 0.7837

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.