Interested in working on the development of this resource? Apply here.

4:68619638 C / T


Filter Status
PASS
dbSNP
rs104893842
Allele Frequency
0.0001736
Filtering AF
0.000115 (European (Non-Finnish))
Allele Count
21 / 120978
UCSC
4-68619638-C-T
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 4 transcripts in 2 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 13 66566 0 0.0001953
East Asian 1 8636 0 0.0001158
Other 0 904 0 0
African 0 10390 0 0
Latino 2 11428 0 0.000175
South Asian 0 16486 0 0
European (Finnish) 5 6568 0 0.0007613
Total 21 120978 0 0.0001736

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.