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4:68619737 T / C


Filter Status
PASS
dbSNP
rs104893836
Allele Frequency
0.002522
Filtering AF
0.003579 (European (Non-Finnish))
Allele Count
306 / 121330
UCSC
4-68619737-T-C
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 4 transcripts in 2 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 265 66712 0 0.003972
East Asian 0 8654 0 0
Other 2 908 0 0.002203
African 5 10406 0 0.0004805
Latino 10 11530 0 0.0008673
South Asian 12 16508 0 0.0007269
European (Finnish) 12 6612 0 0.001815
Total 306 121330 0 0.002522

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.