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4:73942678 C / T


Filter Status
PASS
dbSNP
rs2306058
Allele Frequency
0.1709
Filtering AF
0.2552 (East Asian)
Allele Count
20693 / 121066
UCSC
4-73942678-C-T
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 5 transcripts in 1 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 10592 66578 833 0.1591
East Asian 2285 8648 302 0.2642
Other 141 908 18 0.1553
African 356 10402 9 0.03422
Latino 2866 11574 344 0.2476
South Asian 3786 16342 465 0.2317
European (Finnish) 667 6614 31 0.1008
Total 20693 121066 2002 0.1709

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.