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4:84200234 C / T


Warning! This variant is only covered in 25699 individuals (adjusted allele number = 51398).
This means that the site is covered in fewer than 80% of the individuals in ExAC, which may indicate a low-quality site.


Filter Status
PASS
dbSNP
rs121918233
Allele Frequency
5.837e-05
Filtering AF
3e-05 (European (Non-Finnish))
Allele Count
3 / 51398
UCSC
4-84200234-C-T
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 3 26834 0 0.0001118
East Asian 0 3442 0 0
Other 0 468 0 0
African 0 4866 0 0
Latino 0 2992 0 0
South Asian 0 9524 0 0
European (Finnish) 0 3272 0 0
Total 3 51398 0 5.837e-05

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.