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5:101726770 T / C


Filter Status
PASS
dbSNP
rs10073892
Allele Frequency
0.2426
Filtering AF
0.2963 (European (Non-Finnish))
Allele Count
29384 / 121114
UCSC
5-101726770-T-C
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 6 transcripts in 1 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 19981 66648 3064 0.2998
East Asian 1101 8550 69 0.1288
Other 271 906 39 0.2991
African 489 10402 21 0.04701
Latino 1866 11512 160 0.1621
South Asian 2979 16490 265 0.1807
European (Finnish) 2697 6606 557 0.4083
Total 29384 121114 4175 0.2426

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.