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5:102338811 A / G


Filter Status
PASS
dbSNP
rs35658696
Allele Frequency
0.0327
Filtering AF
0.0436 (European (Non-Finnish))
Allele Count
3897 / 119172
UCSC
5-102338811-A-G
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 2943 65458 67 0.04496
East Asian 0 8542 0 0
Other 35 888 0 0.03941
African 82 10272 1 0.007983
Latino 111 11254 0 0.009863
South Asian 316 16196 11 0.01951
European (Finnish) 410 6562 14 0.06248
Total 3897 119172 93 0.0327

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.