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5:121786403 C / T


Filter Status
PASS
dbSNP
rs28937592
Allele Frequency
0.003626
Filtering AF
0.005183 (European (Non-Finnish))
Allele Count
438 / 120808
UCSC
5-121786403-C-T
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 376 66502 0 0.005654
East Asian 0 8638 0 0
Other 3 908 0 0.003304
African 4 10066 0 0.0003974
Latino 13 11570 0 0.001124
South Asian 2 16510 0 0.0001211
European (Finnish) 40 6614 0 0.006048
Total 438 120808 0 0.003626

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.