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5:131728298 G / A

Note: This variant is multiallelic! The other alt alleles are:

Filter Status
PASS
dbSNP
rs11568513
Allele Frequency
0.0007668
Filtering AF
0.001155 (South Asian)
Allele Count
93 / 121276
UCSC
5-131728298-G-A
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 8 transcripts in 1 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 54 66692 0 0.0008097
East Asian 1 8652 0 0.0001156
Other 0 908 0 0
African 5 10402 0 0.0004807
Latino 2 11554 0 0.0001731
South Asian 27 16496 0 0.001637
European (Finnish) 4 6572 0 0.0006086
Total 93 121276 0 0.0007668

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.