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5:135288632 A / G


Filter Status
PASS
dbSNP
rs62623707
Allele Frequency
0.02976
Filtering AF
0.04067 (European (Non-Finnish))
Allele Count
3612 / 121354
UCSC
5-135288632-A-G
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 7 transcripts in 2 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 2799 66696 64 0.04197
East Asian 1 8652 0 0.0001156
Other 22 908 0 0.02423
African 79 10402 0 0.007595
Latino 250 11574 3 0.0216
South Asian 165 16508 2 0.009995
European (Finnish) 296 6614 4 0.04475
Total 3612 121354 73 0.02976

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.