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5:31401447 A / G


Filter Status
PASS
dbSNP
rs10719
Allele Frequency
0.6885
Filtering AF
0.7873 (European (Non-Finnish))
Allele Count
82821 / 120288
UCSC
5-31401447-A-G
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 7 transcripts in 1 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 52780 66556 20952 0.793
East Asian 2802 8504 468 0.3295
Other 609 892 208 0.6827
African 3804 9740 774 0.3906
Latino 7531 11500 2460 0.6549
South Asian 10390 16484 3300 0.6303
European (Finnish) 4905 6612 1811 0.7418
Total 82821 120288 29973 0.6885

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.