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5:37157484 C / T


Filter Status
PASS
dbSNP
rs111294855
Allele Frequency
0.002016
Filtering AF
0.003025 (European (Non-Finnish))
Allele Count
223 / 110602
UCSC
5-37157484-C-T
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 11 transcripts in 1 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 206 60480 1 0.003406
East Asian 0 8090 0 0
Other 0 832 0 0
African 6 8056 0 0.0007448
Latino 3 10964 0 0.0002736
South Asian 0 15660 0 0
European (Finnish) 8 6520 0 0.001227
Total 223 110602 1 0.002016

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.