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5:68728915 C / T

Note: This variant is multiallelic! The other alt alleles are:

Filter Status
PASS
dbSNP
rs118203957
Allele Frequency
0.0001318
Filtering AF
0.00015 (European (Non-Finnish))
Allele Count
16 / 121374
UCSC
5-68728915-C-T
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 16 66710 0 0.0002398
East Asian 0 8650 0 0
Other 0 908 0 0
African 0 10402 0 0
Latino 0 11578 0 0
South Asian 0 16512 0 0
European (Finnish) 0 6614 0 0
Total 16 121374 0 0.0001318

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.