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6:131897806 C / T


Filter Status
PASS
dbSNP
rs104893944
Allele Frequency
4.123e-05
Filtering AF
3e-05 (Latino)
Allele Count
5 / 121270
UCSC
6-131897806-C-T
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 3 66686 0 4.499e-05
East Asian 0 8634 0 0
Other 0 908 0 0
African 0 10396 0 0
Latino 2 11538 0 0.0001733
South Asian 0 16506 0 0
European (Finnish) 0 6602 0 0
Total 5 121270 0 4.123e-05

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.