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6:154360797 A / G


Filter Status
PASS
dbSNP
rs1799971
Allele Frequency
0.1856
Filtering AF
0.3707 (East Asian)
Allele Count
22327 / 120298
UCSC
6-154360797-A-G
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 18 transcripts in 1 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 8615 66534 593 0.1295
East Asian 3278 8590 637 0.3816
Other 167 882 20 0.1893
African 252 9766 7 0.0258
Latino 2580 11556 297 0.2233
South Asian 6024 16448 1180 0.3662
European (Finnish) 1411 6522 154 0.2163
Total 22327 120298 2888 0.1856

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.