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6:16290761 T / A

Warning! This variant is found in phase with 6-16290763-T-G in 2 individuals, altering its functional interpretation
.

Filter Status
PASS
dbSNP
rs1042391
Allele Frequency
0.5444
Filtering AF
0.8717 (East Asian)
Allele Count
66091 / 121402
UCSC
6-16290761-T-A
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 4 transcripts in 1 genes:

missense
Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 28025 66738 5900 0.4199
East Asian 7684 8650 3414 0.8883
Other 445 908 113 0.4901
African 8673 10406 3626 0.8335
Latino 6906 11576 2070 0.5966
South Asian 10940 16512 3691 0.6625
European (Finnish) 3418 6612 904 0.5169
Total 66091 121402 19718 0.5444

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.