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6:18122506 G / A


Filter Status
PASS
dbSNP
rs10949483
Allele Frequency
0.4211
Filtering AF
0.5611 (Latino)
Allele Count
42208 / 100224
UCSC
6-18122506-G-A
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 1 transcripts in 1 genes:

missense
Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 23138 54260 4596 0.4264
East Asian 3137 7272 618 0.4314
Other 309 728 64 0.4245
African 1855 6894 226 0.2691
Latino 5753 10032 1529 0.5735
South Asian 5473 15572 949 0.3515
European (Finnish) 2543 5466 543 0.4652
Total 42208 100224 8525 0.4211

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.