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6:20546697 G / A


Filter Status
PASS
dbSNP
rs111739077
Allele Frequency
0.005372
Filtering AF
0.006919 (European (Non-Finnish))
Allele Count
651 / 121192
UCSC
6-20546697-G-A
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 3 transcripts in 1 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 497 66608 0 0.007462
East Asian 1 8648 0 0.0001156
Other 5 908 0 0.005507
African 9 10362 0 0.0008686
Latino 32 11562 0 0.002768
South Asian 67 16490 0 0.004063
European (Finnish) 40 6614 0 0.006048
Total 651 121192 0 0.005372

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.