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6:21065449 C / T

Note: This variant is found in phase with 6-21065450-A-G in 7094 individuals.

Filter Status
PASS
dbSNP
rs77152992
Allele Frequency
0.06546
Filtering AF
0.1418 (East Asian)
Allele Count
7944 / 121350
UCSC
6-21065449-C-T
ClinVar
Click to search for variant in Clinvar
Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.

Annotations

This variant falls on 3 transcripts in 1 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 3392 66720 120 0.05084
East Asian 1285 8648 95 0.1486
Other 66 908 1 0.07269
African 653 10392 23 0.06284
Latino 517 11568 17 0.04469
South Asian 1642 16504 108 0.09949
European (Finnish) 389 6610 11 0.05885
Total 7944 121350 375 0.06546

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.