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6:29910604 C / A

Note: This variant is found in phase with 6-29910602-G-T in 25 individuals.
Note: This variant is multiallelic! The other alt alleles are:

Filter Status
Allele Frequency
Filtering AF
0.456 (Latino)
Allele Count
42730 / 110752
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Note: Plot may include low-quality genotypes that were excluded from allele counts in the table above

Note: These are site-level quality metrics: they may be unpredictable for multi-allelic sites.


This variant falls on 9 transcripts in 2 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Frequencies
Population Allele Count Allele Number Number of Homozygotes Allele Frequency
European (Non-Finnish) 23436 61304 3219 0.3823
East Asian 3356 7678 395 0.4371
Other 278 824 21 0.3374
African 3898 9212 464 0.4231
Latino 4863 10414 659 0.467
South Asian 4431 15360 226 0.2885
European (Finnish) 2468 5960 372 0.4141
Total 42730 110752 5356 0.3858

Read Data

This interactive IGV.js visualization shows reads that went into calling this variant.
Note: These are reassembled reads produced by GATK HaplotypeCaller --bamOutput so they accurately represent what HaplotypeCaller was seeing when it called this variant.